Legume crops, such as cowpeas, are crucial for the nutrition of millions in Sub-Saharan Africa. They are also essential for sustainable crop production systems because of their capacity to fix atmospheric nitrogen. We aim to contribute to the development of legume cultivars that combine improved nutritional quality and better adaptation to environmental stresses. This will be achieved through a deeper understanding of the genetic basis of key nutritional and agronomic traits and the development of genetic markers that can be used for stacking them into improved cultivars.
Enhancing mineral content and bioavailability
Improving the mineral content and/or bioavailability of indigenous and staple food crops is critical to combat the prevalence of micronutrient malnutrition among low-income communities in sub-Saharan Africa. Previous efforts to increase the concentrations of iron and zinc in some staple food crops have been limited by the tight homeostasis of these elements, because they are toxic to plants. Therefore, instead of attempting to improve mineral density alone, we aim to find genetic variants with reduced phytates, tannins, and polyphenols that can be utilised to enhance mineral bioavailability.
Understanding the interaction between quality traits
Seeds are reservoirs of various compounds such as proteins, starch, sugars, fat, and minerals. Manipulation of one or more of these constituents can lead to a cascade of changes that can affect the chemical composition, morphology, and viability of seeds. For instance, phytate concentration is linked not only to mineral bioavailability, but also to raffinose family oligosaccharides, cooking quality of legumes, and seed germination. These relationships pose a conundrum for breeding efforts, and we aim to better understand these relationships at the metabolic and genetic levels.
Drought tolerance
Drought tolerance is a complex trait that is influenced by various morphological and physiological characteristics. We aim to identify key traits (either morphological or physiological) related to drought tolerance that can be adapted for high-throughput screening methods. This would facilitate the study of large populations and enable GWAS, QTL mapping, or mutant screening for drought tolerance.
I completed my PhD at the University of Reading in Professor Donal O’Sullivan’s lab, where I worked on characterising faba bean seed protein composition and mapping its underlying genetics. I then joined John Innes Centre in Norwich as a postdoctoral researcher to work on the genetics of pea nutritional quality in the labs of Professor Janneke Balk and Professor Claire Domoney. My current research at Crop Science Centre aims to enhance the nutritional and culinary quality of legumes and other underutilised food crops by discovering the underlying genetic mechanisms.
Other research groupsPublication
Identification of significant genome-wide associations and QTL underlying variation in seed protein composition in pea (Pisum sativum, L.).
Date: 8 July 2024
Contributors: Warsame, A. O., Balk, J., & Domoney, C
Journal: bioRxiv
Publication
Genetic analysis of global faba bean diversity, agronomic traits and selection signatures
Date: 19 April 2023
Contributors: Cathrine Kiel Skovbjerg, Deepti Angra, Tom Robertson‑Shersby‑Harvie, Jonathan Kreplak, Gabriel Keeble‑Gagnère, Sukhjiwan Kaur, Wolfgang Ecke, Alex Windhorst, Linda Kærgaard Nielsen, Andrea Schiemann, Jens Knudsen, Natalia Gutierrez, Vasiliki Tagkouli, Lavinia Ioana Fechete, Luc Janss, ·Jens Stougaard, Ahmed Warsame, Sheila Alves, Hamid Khazaei, Wolfgang Link, Ana Maria Torres, Donal Martin O’Sullivan, Stig Uggerhøj Andersen
Journal: Theoretical and Applied Genetics
Publication
The giant diploid faba genome unlocks variation in a global protein crop.
Date: 8 March 2023
Contributors: Murukarthick Jayakodi, Agnieszka A. Golicz, Jonathan Kreplak, Lavinia I. Fechete, Deepti Angra, Petr Bednář, Elesandro Bornhofen, Hailin Zhang, Raphaël Boussageon, Sukhjiwan Kaur, Kwok Cheung, Jana Čížková, Heidrun Gundlach, Asis Hallab, Baptiste Imbert, Gabriel Keeble-Gagnère, Andrea Koblížková, Lucie Kobrlová, Petra Krejčí, Troels W. Mouritzen, Pavel Neumann, Marcin Nadzieja, Linda Kærgaard Nielsen, Petr Novák, Jihad Orabi, Sudharsan Padmarasu, Tom Robertson-Shersby-Harvie, Laura Ávila Robledillo, Andrea Schiemann, Jaakko Tanskanen, Petri Törönen, Ahmed O. Warsame, Alexander H. J. Wittenberg, Axel Himmelbach, Grégoire Aubert, Pierre-Emmanuel Courty, Jaroslav Doležel, Liisa U. Holm, Luc L. Janss, Hamid Khazaei, Jiří Macas, Martin Mascher, Petr Smýkal, Rod J. Snowdon, Nils Stein, Frederick L. Stoddard, Jens Stougaard, Nadim Tayeh, Ana M. Torres, Björn Usadel, Ingo Schubert, Donal Martin O’Sullivan, Alan H. Schulman & Stig Uggerhøj Andersen
Journal: Nature
Publication
Seed Development and Protein Accumulation Patterns in Faba Bean (Vicia faba, L.)
Date: 18 July 2022
Contributors: Cathrine Kiel Skovbjerg, Deepti Angra, Tom Robertson‑Shersby‑Harvie, Jonathan Kreplak, Gabriel Keeble‑Gagnère, Sukhjiwan Kaur, Wolfgang Ecke, Alex Windhorst, Linda Kærgaard Nielsen, Andrea Schiemann, Jens Knudsen, Natalia Gutierrez, Vasiliki Tagkouli, Lavinia Ioana Fechete, Luc Janss, Jens Stougaard, Ahmed Warsame, Sheila Alves, Hamid Khazaei, Wolfgang Link, Ana Maria Torres, Donal Martin O’Sullivan, Stig Uggerhøj Andersen
Journal: Journal of Agricultural and Food Chemistry
Publication
Identification and Quantification of Major Faba Bean Seed Proteins
Date: 17 July 2020
Contributors: Ahmed O. Warsame, Nicholas Michael, Donal M. O’Sullivan, Paola Tosi
Journal: Journal of Agricultural and Food Chemistry
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